Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytoplasmic filament protein cfpa | TPEKDK363_RS03860 | Not Available | Negative | 814915 - 816951 | 78575.7 |
| hypothetical protein | TPEKDK363_RS03865 | Not Available | Negative | 816929 - 817150 | 8606.61 |
| vwa domain-containing protein | TPEKDK363_RS03870 | Not Available | Positive | 817120 - 817791 | 25941.1 |
| vascular adhesin/metalloprotease pallilysin | TPEKDK363_RS03875 | Not Available | Positive | 817828 - 818541 | 25770.2 |
| hypothetical protein | TPEKDK363_RS03880 | Not Available | Negative | 818679 - 819794 | 41884.8 |
| hypothetical protein | TPEKDK363_RS03885 | Not Available | Negative | 819902 - 820186 | 10330.7 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | TPEKDK363_RS03890 | Not Available | Negative | 820183 - 821553 | 52575.5 |
| pts sugar transporter subunit iia | TPEKDK363_RS03895 | Not Available | Negative | 821595 - 822251 | 24748.8 |
| methionyl-trna formyltransferase | TPEKDK363_RS03900 | Not Available | Negative | 822337 - 823296 | 34262.7 |
| peptide deformylase | TPEKDK363_RS03905 | Not Available | Negative | 823300 - 823788 | 18324.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





