Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome silencing factor | TPEKDK363_RS03810 | Not Available | Negative | 805865 - 806200 | 12276.7 |
| lcp family protein | TPEKDK363_RS03815 | Not Available | Negative | 806197 - 807393 | 44213.3 |
| bis(5'-nucleosyl)-tetraphosphatase (symmetrical) yqek | TPEKDK363_RS03820 | Not Available | Negative | 807467 - 808180 | 25719.0 |
| nicotinate (nicotinamide) nucleotide adenylyltransferase | TPEKDK363_RS03825 | Not Available | Negative | 808161 - 808775 | 22650.9 |
| obg family gtpase cgta | TPEKDK363_RS03830 | Not Available | Negative | 808772 - 809902 | 41147.4 |
| 50s ribosomal protein l27 | TPEKDK363_RS03835 | Not Available | Negative | 810020 - 810283 | 9415.41 |
| ribosomal-processing cysteine protease prp | TPEKDK363_RS03840 | Not Available | Negative | 810314 - 810640 | 11392.0 |
| 50s ribosomal protein l21 | TPEKDK363_RS03845 | Not Available | Negative | 810653 - 810970 | 11816.4 |
| putative pep-binding protein | TPEKDK363_RS03850 | Not Available | Negative | 811077 - 813782 | 100340.0 |
| hypothetical protein | TPEKDK363_RS03855 | Not Available | Negative | 813792 - 814826 | 37781.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





