Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine hydrolase family protein | TPEKDK363_RS03610 | Not Available | Negative | 766246 - 767082 | 31128.2 |
| duf2715 domain-containing protein | TPEKDK363_RS03615 | Not Available | Negative | 767144 - 767779 | 22390.3 |
| duf2715 domain-containing protein | TPEKDK363_RS03620 | Not Available | Negative | 767783 - 768328 | 18861.8 |
| hypothetical protein | TPEKDK363_RS03625 | Not Available | Negative | 768441 - 768833 | 14205.0 |
| dna-directed rna polymerase subunit omega | TPEKDK363_RS03630 | Not Available | Negative | 768971 - 769174 | 7349.86 |
| Trna-pro | Not Available | Not Available | Positive | 769254 - 769327 | Not Available |
| m23 family metallopeptidase | TPEKDK363_RS03640 | Not Available | Negative | 769344 - 770576 | 44861.1 |
| single-stranded-dna-specific exonuclease recj | TPEKDK363_RS03645 | Not Available | Negative | 770576 - 772696 | 78766.7 |
| penicillin-binding protein 1a | TPEKDK363_RS03650 | Not Available | Negative | 772839 - 775493 | 98459.6 |
| lysm peptidoglycan-binding domain-containing m23 family metallopeptidase | TPEKDK363_RS03655 | Not Available | Negative | 775790 - 776716 | 33624.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





