Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-binding protein | TPEKDK363_RS00315 | Not Available | Negative | 70172 - 70702 | 19044.1 |
| 30s ribosomal protein s6 | TPEKDK363_RS00320 | Not Available | Negative | 70711 - 70992 | 10916.3 |
| hypothetical protein | TPEKDK363_RS00325 | Not Available | Positive | 71134 - 71709 | 22080.6 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | TPEKDK363_RS00330 | Not Available | Positive | 71765 - 72310 | 20737.6 |
| hypothetical protein | TPEKDK363_RS00335 | Not Available | Positive | 72355 - 72669 | 11983.7 |
| tetratricopeptide repeat protein | TPEKDK363_RS00340 | Not Available | Positive | 72657 - 73829 | 45504.4 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | TPEKDK363_RS00345 | Not Available | Positive | 74010 - 75032 | 37521.8 |
| hypothetical protein | TPEKDK363_RS00350 | Not Available | Negative | 75088 - 75471 | 14183.5 |
| hypothetical protein | TPEKDK363_RS00355 | Not Available | Negative | 75468 - 75854 | 13552.9 |
| atp-dependent chaperone clpb | TPEKDK363_RS00360 | Not Available | Negative | 75905 - 78541 | 98987.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





