Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 744472 - 744543 | Not Available |
| hypothetical protein | TPEKDK363_RS03510 | Not Available | Positive | 744636 - 745559 | 34765.9 |
| hypothetical protein | TPEKDK363_RS03515 | Not Available | Positive | 745556 - 745873 | 11586.8 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | TPEKDK363_RS03520 | Not Available | Negative | 745914 - 746972 | 38075.6 |
| alanine racemase | TPEKDK363_RS03525 | Not Available | Negative | 747023 - 748156 | 40314.3 |
| sam-dependent methyltransferase | TPEKDK363_RS03530 | Not Available | Negative | 748185 - 748787 | 21318.6 |
| polyprenyl synthetase family protein | TPEKDK363_RS03535 | Not Available | Positive | 748880 - 749974 | 40172.8 |
| substrate-binding domain-containing protein | TPEKDK363_RS03545 | Not Available | Positive | 750267 - 751478 | 43026.6 |
| sugar abc transporter atp-binding protein | TPEKDK363_RS03550 | Not Available | Positive | 751598 - 753088 | 55222.7 |
| galactoside abc transporter permease | TPEKDK363_RS03555 | Not Available | Positive | 753103 - 754698 | 57878.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





