Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-phe | Not Available | Not Available | Positive | 699689 - 699761 | Not Available |
| methyl-accepting chemotaxis protein | TPEKDK363_RS03305 | Not Available | Positive | 699762 - 701696 | 70422.4 |
| methyl-accepting chemotaxis protein | TPEKDK363_RS03310 | Not Available | Positive | 701720 - 703564 | 67274.2 |
| histidine--trna ligase | TPEKDK363_RS03315 | Not Available | Negative | 703582 - 704910 | 50201.9 |
| phospho-sugar mutase | TPEKDK363_RS03325 | Not Available | Positive | 705051 - 706811 | 65169.2 |
| exonuclease domain-containing protein | TPEKDK363_RS03330 | Not Available | Positive | 706808 - 707455 | 24240.1 |
| lysine--trna ligase | TPEKDK363_RS03335 | Not Available | Negative | 707452 - 709038 | 60904.5 |
| lic_12708 family protein | TPEKDK363_RS03340 | Not Available | Negative | 709304 - 710626 | 49361.6 |
| serine--trna ligase | TPEKDK363_RS03345 | Not Available | Negative | 710538 - 711818 | 48016.8 |
| tetratricopeptide repeat protein | TPEKDK363_RS03350 | Not Available | Negative | 711868 - 713844 | 75067.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





