Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cher family methyltransferase | TPEKDK363_RS03245 | Not Available | Positive | 689967 - 690878 | 34459.1 |
| protein-glutamate methylesterase/protein-glutamine glutaminase | TPEKDK363_RS03250 | Not Available | Positive | 690926 - 692137 | 44002.3 |
| tryptophan--trna ligase | TPEKDK363_RS03255 | Not Available | Positive | 692242 - 693255 | 37564.5 |
| bifunctional methionine sulfoxide reductase b/a protein | TPEKDK363_RS03260 | Not Available | Positive | 693396 - 694271 | 32725.4 |
| nad-dependent dna ligase liga | TPEKDK363_RS03265 | Not Available | Positive | 694390 - 696861 | 91103.5 |
| dna repair protein reco | TPEKDK363_RS03270 | Not Available | Negative | 696896 - 697666 | 28128.2 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | TPEKDK363_RS03275 | Not Available | Negative | 697704 - 698654 | 36176.0 |
| hypothetical protein | TPEKDK363_RS03285 | Not Available | Negative | 698878 - 699312 | 15337.3 |
| Trna-arg | Not Available | Not Available | Positive | 699393 - 699466 | Not Available |
| Trna-his | Not Available | Not Available | Positive | 699481 - 699552 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





