Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major outer sheath n-terminal domain-containing protein | TPEKDK363_RS03195 | Not Available | Negative | 673071 - 674900 | 66500.1 |
| major outer sheath n-terminal domain-containing protein | TPEKDK363_RS03200 | Not Available | Negative | 674959 - 677229 | 81020.5 |
| tetratricopeptide repeat protein | TPEKDK363_RS03205 | Not Available | Negative | 677289 - 679070 | 66781.0 |
| transglycosylase slt domain-containing protein | TPEKDK363_RS03210 | Not Available | Positive | 679456 - 680826 | 49778.9 |
| ompa family protein | TPEKDK363_RS03215 | Not Available | Positive | 680830 - 682260 | 52743.6 |
| hypothetical protein | TPEKDK363_RS03220 | Not Available | Positive | 682260 - 683012 | 28875.4 |
| exonuclease sbccd subunit d | TPEKDK363_RS03225 | Not Available | Positive | 683009 - 684184 | 44300.0 |
| exonuclease subunit sbcc | TPEKDK363_RS03230 | Not Available | Positive | 684181 - 687324 | 118680.0 |
| nicotinate phosphoribosyltransferase | TPEKDK363_RS03235 | Not Available | Positive | 687321 - 688802 | 54581.4 |
| hypothetical protein | TPEKDK363_RS03240 | Not Available | Positive | 688973 - 689797 | 31326.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





