Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rip metalloprotease rsep | TPEKDK363_RS03090 | Not Available | Negative | 653587 - 654939 | 49581.8 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | TPEKDK363_RS03095 | Not Available | Negative | 654936 - 656066 | 40954.5 |
| phosphatidate cytidylyltransferase | TPEKDK363_RS03100 | Not Available | Negative | 656063 - 656926 | 30868.7 |
| di-trans,poly-cis-decaprenylcistransferase | TPEKDK363_RS03105 | Not Available | Negative | 656923 - 657609 | 26271.8 |
| ribosome recycling factor | TPEKDK363_RS03110 | Not Available | Negative | 657615 - 658166 | 20504.7 |
| translation elongation factor ts | TPEKDK363_RS03115 | Not Available | Negative | 658270 - 659142 | 31784.4 |
| 30s ribosomal protein s2 | TPEKDK363_RS03120 | Not Available | Negative | 659233 - 660108 | 33118.5 |
| Trna-arg | Not Available | Not Available | Positive | 660306 - 660379 | Not Available |
| heat repeat domain-containing protein | TPEKDK363_RS03130 | Not Available | Negative | 660474 - 661364 | 31911.7 |
| asparagine--trna ligase | TPEKDK363_RS03140 | Not Available | Positive | 661682 - 663253 | 57747.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





