Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor n(5)-glutamine methyltransferase | TPEKDK363_RS00265 | Not Available | Positive | 60640 - 61656 | 36848.0 |
| ribonucleotide-diphosphate reductase subunit beta | TPEKDK363_RS00270 | Not Available | Negative | 61745 - 62800 | 41201.8 |
| trmh family rna methyltransferase | TPEKDK363_RS00275 | Not Available | Positive | 62971 - 63930 | 35519.6 |
| oadg family protein | TPEKDK363_RS00280 | Not Available | Positive | 64137 - 64373 | 7934.9 |
| sodium-extruding oxaloacetate decarboxylase subunit alpha | TPEKDK363_RS00285 | Not Available | Positive | 64370 - 66151 | 64087.0 |
| sodium ion-translocating decarboxylase subunit beta | TPEKDK363_RS00290 | Not Available | Positive | 66163 - 67572 | 49483.5 |
| replicative dna helicase | TPEKDK363_RS00295 | Not Available | Negative | 67647 - 68963 | 47798.8 |
| hypothetical protein | TPEKDK363_RS00300 | Not Available | Negative | 68947 - 69174 | 8153.82 |
| 50s ribosomal protein l9 | TPEKDK363_RS00305 | Not Available | Negative | 69180 - 69650 | 17505.3 |
| 30s ribosomal protein s18 | TPEKDK363_RS00310 | Not Available | Negative | 69756 - 70055 | 11553.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





