Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uracil 4-sulfurtransferase thii | TPEKDK363_RS02890 | Not Available | Positive | 607136 - 608341 | 44622.3 |
| transketolase | TPEKDK363_RS02895 | Not Available | Negative | 608394 - 610379 | 71174.0 |
| tpm domain-containing protein | TPEKDK363_RS02900 | Not Available | Negative | 610490 - 611350 | 30180.2 |
| n-acetylneuraminate synthase family protein | TPEKDK363_RS02905 | Not Available | Positive | 611512 - 612648 | 40534.8 |
| j domain-containing protein | TPEKDK363_RS02910 | Not Available | Positive | 612639 - 613052 | 15724.7 |
| hypothetical protein | TPEKDK363_RS02915 | Not Available | Positive | 613049 - 615085 | 76573.6 |
| duf459 domain-containing protein | TPEKDK363_RS02920 | Not Available | Negative | 614967 - 616184 | 45833.3 |
| mboat family o-acyltransferase | TPEKDK363_RS02925 | Not Available | Negative | 616198 - 617685 | 56887.6 |
| periplasmic-type flagellar collar protein flbb | TPEKDK363_RS02930 | Not Available | Negative | 617717 - 618316 | 22567.2 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | TPEKDK363_RS02935 | Not Available | Negative | 618416 - 619048 | 22075.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





