Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | TPEKDK363_RS02840 | Not Available | Negative | 597565 - 599052 | 53772.2 |
| phosphatase pap2 family protein | TPEKDK363_RS02845 | Not Available | Negative | 599056 - 600144 | 38681.6 |
| hypothetical protein | TPEKDK363_RS02850 | Not Available | Negative | 600157 - 600690 | 20173.0 |
| Trna-cys | Not Available | Not Available | Positive | 600766 - 600837 | Not Available |
| ai-2e family transporter | TPEKDK363_RS02860 | Not Available | Positive | 600934 - 602145 | 45286.6 |
| had family hydrolase | TPEKDK363_RS02865 | Not Available | Positive | 602105 - 602848 | 27519.3 |
| dicarboxylate/amino acid:cation symporter | TPEKDK363_RS02870 | Not Available | Negative | 602922 - 604103 | 41542.3 |
| aspartate--ammonia ligase | TPEKDK363_RS02875 | Not Available | Negative | 604326 - 605330 | 37214.5 |
| duf1007 family protein | TPEKDK363_RS02880 | Not Available | Positive | 605423 - 606136 | 27763.7 |
| nickel/cobalt transporter | TPEKDK363_RS02885 | Not Available | Positive | 606166 - 607074 | 32208.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





