Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| anti-sigma factor antagonist | TPEKDK363_RS02775 | Not Available | Positive | 583641 - 584006 | 13371.5 |
| gtpase era | TPEKDK363_RS02785 | Not Available | Positive | 584136 - 585095 | 35770.4 |
| diphosphate--fructose-6-phosphate 1-phosphotransferase | TPEKDK363_RS02790 | Not Available | Negative | 585092 - 586813 | 62444.6 |
| holliday junction branch migration protein ruva | TPEKDK363_RS02795 | Not Available | Negative | 586873 - 587556 | 24400.4 |
| endonuclease/exonuclease/phosphatase family protein | TPEKDK363_RS02800 | Not Available | Negative | 587598 - 589472 | 68397.9 |
| galactose abc transporter substrate-binding protein | TPEKDK363_RS02805 | Not Available | Negative | 589497 - 590561 | 38367.4 |
| s1c family serine protease | TPEKDK363_RS02810 | Not Available | Negative | 590646 - 592361 | 62737.7 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | TPEKDK363_RS02815 | Not Available | Negative | 592358 - 593488 | 38886.9 |
| upf0164 family protein | TPEKDK363_RS02825 | Not Available | Positive | 593632 - 594930 | 46864.8 |
| atp-dependent clp protease atp-binding subunit | TPEKDK363_RS02835 | Not Available | Positive | 595080 - 597524 | 91588.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





