Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | TPEKDK363_RS02620 | Not Available | Positive | 549566 - 550813 | 44002.1 |
| trk system potassium transporter trka | TPEKDK363_RS02625 | Not Available | Positive | 550851 - 552287 | 51104.3 |
| excinuclease abc subunit uvra | TPEKDK363_RS02630 | Not Available | Positive | 552401 - 555283 | 106017.0 |
| lps-assembly protein lptd | TPEKDK363_RS02635 | Not Available | Positive | 555280 - 558255 | 112447.0 |
| murein biosynthesis integral membrane protein murj | TPEKDK363_RS02640 | Not Available | Negative | 558269 - 559849 | 58055.7 |
| crossover junction endodeoxyribonuclease ruvc | TPEKDK363_RS02645 | Not Available | Negative | 559846 - 560436 | 20943.4 |
| thiamine diphosphokinase | TPEKDK363_RS02650 | Not Available | Negative | 560418 - 561110 | 25568.4 |
| sigma-54-dependent transcriptional regulator | TPEKDK363_RS02655 | Not Available | Negative | 561107 - 562483 | 50965.9 |
| atp-binding protein | TPEKDK363_RS05435 | Not Available | Negative | 562493 - 562849 | 12921.5 |
| histidine kinase dimerization/phospho-acceptor domain-containing protein | TPEKDK363_RS02660 | Not Available | Negative | 562858 - 563682 | 31493.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





