Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s16 | TPEKDK363_RS05525 | Not Available | Negative | 542482 - 542529 | 1568.85 |
| Trna-lys | Not Available | Not Available | Positive | 542698 - 542770 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 542830 - 542910 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 542921 - 542992 | Not Available |
| trigger factor | TPEKDK363_RS02590 | Not Available | Positive | 543073 - 544389 | 49551.1 |
| atp-dependent clp protease proteolytic subunit | TPEKDK363_RS02595 | Not Available | Positive | 544394 - 545005 | 22346.9 |
| atp-dependent clp protease atp-binding subunit clpx | TPEKDK363_RS02600 | Not Available | Positive | 544992 - 546239 | 45480.6 |
| redoxin domain-containing protein | TPEKDK363_RS02605 | Not Available | Positive | 546336 - 546902 | 20710.0 |
| translation elongation factor 4 | TPEKDK363_RS02610 | Not Available | Negative | 547083 - 548900 | 67645.5 |
| card family transcriptional regulator | TPEKDK363_RS02615 | Not Available | Positive | 548943 - 549569 | 23790.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





