Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | TPEKDK363_RS00210 | Not Available | Positive | 49511 - 50443 | 33202.1 |
| flagellar assembly lytic transglycosylase | TPEKDK363_RS00215 | Not Available | Positive | 50424 - 52556 | 81726.7 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | TPEKDK363_RS00220 | Not Available | Positive | 52596 - 54488 | 70179.7 |
| adenosine deaminase | TPEKDK363_RS00225 | Not Available | Negative | 54544 - 55443 | 34544.6 |
| stage 0 sporulation family protein | TPEKDK363_RS00235 | Not Available | Negative | 55805 - 56431 | 24336.7 |
| yaar family protein | TPEKDK363_RS00240 | Not Available | Negative | 56524 - 57045 | 19642.7 |
| bactofilin family protein | TPEKDK363_RS00245 | Not Available | Negative | 57051 - 57482 | 15064.4 |
| m23 family metallopeptidase | TPEKDK363_RS00250 | Not Available | Negative | 57504 - 58595 | 39689.4 |
| phosphoribosyltransferase | TPEKDK363_RS00255 | Not Available | Negative | 58826 - 59434 | 23209.1 |
| peptide chain release factor 1 | TPEKDK363_RS00260 | Not Available | Positive | 59585 - 60640 | 40206.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





