Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pqq-like beta-propeller repeat protein | TPEKDK363_RS02470 | Not Available | Negative | 520997 - 522892 | 68128.2 |
| methyl-accepting chemotaxis protein | TPEKDK363_RS02475 | Not Available | Positive | 522803 - 525340 | 91679.5 |
| Trna-thr | Not Available | Not Available | Positive | 525453 - 525527 | Not Available |
| Trna-tyr | Not Available | Not Available | Positive | 525537 - 525618 | Not Available |
| mbl fold metallo-hydrolase | TPEKDK363_RS02490 | Not Available | Positive | 525800 - 526768 | 37034.2 |
| hypothetical protein | TPEKDK363_RS02495 | Not Available | Positive | 526765 - 526953 | 7230.66 |
| endolytic transglycosylase mltg | TPEKDK363_RS02500 | Not Available | Positive | 527113 - 528015 | 33229.2 |
| dna primase | TPEKDK363_RS02505 | Not Available | Positive | 528019 - 529836 | 67912.9 |
| rna polymerase sigma factor rpod | TPEKDK363_RS02510 | Not Available | Positive | 529833 - 531668 | 70906.6 |
| zinc ribbon domain-containing protein | TPEKDK363_RS02515 | Not Available | Positive | 531678 - 532499 | 31435.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





