Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-processing protein dpra | TPEKDK363_RS02010 | Not Available | Positive | 419366 - 420274 | 33107.1 |
| type i dna topoisomerase | TPEKDK363_RS02015 | Not Available | Positive | 420307 - 422502 | 82401.7 |
| tyrosine recombinase xerc | TPEKDK363_RS02020 | Not Available | Positive | 422495 - 423388 | 33939.1 |
| flagellar basal body rod protein flgb | TPEKDK363_RS02025 | Not Available | Positive | 423536 - 423946 | 15646.6 |
| flagellar basal body rod protein flgc | TPEKDK363_RS02030 | Not Available | Positive | 423964 - 424419 | 16376.5 |
| flagellar hook-basal body complex protein flie | TPEKDK363_RS02035 | Not Available | Positive | 424475 - 424849 | 13703.5 |
| flagellar basal-body ms-ring/collar protein flif | TPEKDK363_RS02040 | Not Available | Positive | 424966 - 426669 | 64642.7 |
| flagellar motor switch protein flig | TPEKDK363_RS02045 | Not Available | Positive | 426674 - 427732 | 39824.9 |
| flagellar assembly protein flih | TPEKDK363_RS02050 | Not Available | Positive | 427780 - 428709 | 35341.2 |
| flagellar protein export atpase flii | TPEKDK363_RS02055 | Not Available | Positive | 428737 - 430080 | 47855.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





