Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription-repair coupling factor | TPEKDK363_RS01745 | Not Available | Negative | 368161 - 371583 | 129959.0 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | TPEKDK363_RS01750 | Not Available | Positive | 371736 - 372827 | 40560.7 |
| duf2715 domain-containing protein | TPEKDK363_RS01760 | Not Available | Positive | 372984 - 373685 | 25268.9 |
| duf2715 domain-containing protein | TPEKDK363_RS01765 | Not Available | Positive | 373774 - 374484 | 25577.4 |
| gx transporter family protein | TPEKDK363_RS01770 | Not Available | Negative | 374504 - 375619 | 40201.4 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | TPEKDK363_RS01775 | Not Available | Negative | 375598 - 376128 | 18429.6 |
| glutamate-5-semialdehyde dehydrogenase | TPEKDK363_RS01780 | Not Available | Positive | 376341 - 377627 | 46532.0 |
| glutamate 5-kinase | TPEKDK363_RS01785 | Not Available | Positive | 377624 - 378514 | 31300.6 |
| ydbc family protein | TPEKDK363_RS01790 | Not Available | Positive | 378646 - 378903 | 9663.36 |
| ribonuclease hi | TPEKDK363_RS01795 | Not Available | Negative | 378900 - 379409 | 18176.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





