Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | TPEKDK363_RS01695 | Not Available | Positive | 358076 - 359293 | 45310.9 |
| type ii caax prenyl endopeptidase rce1 family protein | TPEKDK363_RS05415 | Not Available | Negative | 359290 - 359832 | 19136.4 |
| comec/rec2 family competence protein | TPEKDK363_RS01705 | Not Available | Positive | 359732 - 361375 | 59107.7 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | TPEKDK363_RS01710 | Not Available | Positive | 361356 - 362213 | 32277.6 |
| hypothetical protein | TPEKDK363_RS01715 | Not Available | Positive | 362231 - 362719 | 18368.2 |
| rlua family pseudouridine synthase | TPEKDK363_RS01720 | Not Available | Positive | 362731 - 363726 | 37744.4 |
| folylpolyglutamate synthase/dihydrofolate synthase family protein | TPEKDK363_RS01725 | Not Available | Negative | 363712 - 365184 | 54655.2 |
| udp-n-acetylmuramate--l-alanine ligase | TPEKDK363_RS01730 | Not Available | Positive | 365203 - 366648 | 53735.3 |
| (d)cmp kinase | TPEKDK363_RS01735 | Not Available | Positive | 366769 - 367329 | 20737.1 |
| a/g-specific adenine glycosylase | TPEKDK363_RS01740 | Not Available | Positive | 367323 - 368156 | 31721.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





