Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translocation/assembly module tamb domain-containing protein | TPEKDK363_RS01645 | Not Available | Positive | 341615 - 346021 | 161347.0 |
| outer membrane protein assembly factor bama | TPEKDK363_RS01650 | Not Available | Positive | 346051 - 348540 | 93649.8 |
| omph family outer membrane protein | TPEKDK363_RS01655 | Not Available | Positive | 348597 - 349115 | 19716.7 |
| dna mismatch repair protein muts | TPEKDK363_RS01660 | Not Available | Positive | 349171 - 351873 | 99710.8 |
| glycine hydroxymethyltransferase | TPEKDK363_RS01665 | Not Available | Positive | 351991 - 353532 | 55813.8 |
| Trna-leu | Not Available | Not Available | Positive | 353514 - 353596 | Not Available |
| atp-binding protein | TPEKDK363_RS01675 | Not Available | Negative | 353688 - 355484 | 67733.1 |
| Trna-gly | Not Available | Not Available | Positive | 355549 - 355620 | Not Available |
| decarboxylating nadp(+)-dependent phosphogluconate dehydrogenase | TPEKDK363_RS01685 | Not Available | Negative | 355714 - 357180 | 52770.3 |
| lola family protein | TPEKDK363_RS01690 | Not Available | Positive | 357359 - 358051 | 25559.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





