Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytidylyltransferase domain-containing protein | TPEKDK363_RS01500 | Not Available | Positive | 302282 - 304855 | 95594.2 |
| had family hydrolase | TPEKDK363_RS01505 | Not Available | Positive | 304910 - 305743 | 30940.3 |
| alpha-hydroxy-acid oxidizing protein | TPEKDK363_RS01510 | Not Available | Positive | 305780 - 306661 | 32307.5 |
| ompa family protein | TPEKDK363_RS01515 | Not Available | Positive | 306652 - 307905 | 47611.1 |
| ribose-phosphate pyrophosphokinase | TPEKDK363_RS01520 | Not Available | Positive | 308071 - 309336 | 47434.0 |
| fggy-family carbohydrate kinase | TPEKDK363_RS01525 | Not Available | Positive | 309355 - 310599 | 45557.9 |
| dephospho-coa kinase | TPEKDK363_RS01530 | Not Available | Positive | 310685 - 311320 | 23584.9 |
| spor domain-containing protein | TPEKDK363_RS01535 | Not Available | Positive | 311323 - 312096 | 28178.7 |
| bmp family abc transporter substrate-binding protein | TPEKDK363_RS01540 | Not Available | Positive | 312229 - 313260 | 37883.7 |
| abc transporter atp-binding protein | TPEKDK363_RS01545 | Not Available | Positive | 313257 - 315017 | 64244.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





