Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | TPEKDK363_RS01450 | Not Available | Positive | 290488 - 291279 | 29744.1 |
| deoxycytidylate deaminase | TPEKDK363_RS01455 | Not Available | Negative | 291317 - 291817 | 18411.2 |
| wecb/taga/cpsf family glycosyltransferase | TPEKDK363_RS01460 | Not Available | Negative | 291906 - 292655 | 28941.6 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | TPEKDK363_RS01465 | Not Available | Negative | 292634 - 293473 | 31213.4 |
| s41 family peptidase | TPEKDK363_RS01470 | Not Available | Negative | 293691 - 295151 | 54532.8 |
| 30s ribosomal protein s1 | TPEKDK363_RS01475 | Not Available | Positive | 295340 - 297931 | 95496.2 |
| tetratricopeptide repeat protein | TPEKDK363_RS01480 | Not Available | Positive | 298194 - 298913 | 26436.7 |
| pantetheine-phosphate adenylyltransferase | TPEKDK363_RS01485 | Not Available | Positive | 299091 - 299570 | 17805.7 |
| spiro-spasm protein | TPEKDK363_RS01490 | Not Available | Positive | 299780 - 301354 | 58920.6 |
| hypothetical protein | TPEKDK363_RS01495 | Not Available | Positive | 301305 - 302282 | 36952.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





