Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s ribosomal rna | Not Available | Not Available | Positive | 279630 - 281178 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 281290 - 281363 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 281484 - 284436 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 284485 - 284595 | Not Available |
| bactofilin family protein | TPEKDK363_RS01420 | Not Available | Positive | 284653 - 285018 | 13014.4 |
| tetratricopeptide repeat protein | TPEKDK363_RS01425 | Not Available | Positive | 285015 - 285668 | 24756.8 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | TPEKDK363_RS01430 | Not Available | Positive | 285678 - 287126 | 53104.5 |
| cca trna nucleotidyltransferase | TPEKDK363_RS01435 | Not Available | Positive | 287152 - 288636 | 55144.4 |
| parb/repb/spo0j family partition protein | TPEKDK363_RS01440 | Not Available | Negative | 288633 - 289607 | 35432.2 |
| para family protein | TPEKDK363_RS01445 | Not Available | Negative | 289594 - 290355 | 27343.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





