Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase | TPEKDK363_RS01350 | Not Available | Positive | 269336 - 270388 | 40336.6 |
| hypothetical protein | TPEKDK363_RS01355 | Not Available | Negative | 270454 - 271164 | 28148.5 |
| lysm peptidoglycan-binding domain-containing protein | TPEKDK363_RS01360 | Not Available | Positive | 271327 - 271854 | 19815.0 |
| sh3 domain-containing protein | TPEKDK363_RS01365 | Not Available | Negative | 271985 - 273331 | 51190.2 |
| cyclic nucleotide-binding domain-containing protein | TPEKDK363_RS01370 | Not Available | Positive | 273446 - 274489 | 38285.0 |
| crp/fnr family transcriptional regulator | TPEKDK363_RS01375 | Not Available | Positive | 274482 - 275141 | 25162.4 |
| lamg-like jellyroll fold domain-containing protein | TPEKDK363_RS01380 | Not Available | Positive | 275415 - 276941 | 56073.0 |
| deoxyribose-phosphate aldolase | TPEKDK363_RS01385 | Not Available | Positive | 276946 - 277602 | 23471.3 |
| Tmrna,resume consensus sequence (at 78): tataactgccaattctga | Not Available | Not Available | Positive | 277662 - 278013 | Not Available |
| branched-chain amino acid transport system ii carrier protein | TPEKDK363_RS01395 | Not Available | Negative | 278034 - 279401 | 49068.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





