Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | TPEKDK363_RS01300 | Not Available | Positive | 260993 - 262024 | 38036.1 |
| germn domain-containing protein | TPEKDK363_RS01305 | Not Available | Positive | 262021 - 262494 | 17403.4 |
| flagellar filament outer layer protein flaa | TPEKDK363_RS01310 | Not Available | Positive | 262573 - 263625 | 38859.1 |
| 30s ribosomal protein s20 | TPEKDK363_RS01315 | Not Available | Positive | 263738 - 264025 | 10752.2 |
| hu family dna-binding protein | TPEKDK363_RS01320 | Not Available | Positive | 264057 - 264374 | 11650.1 |
| apolipoprotein n-acyltransferase | TPEKDK363_RS01325 | Not Available | Positive | 264364 - 266004 | 61518.5 |
| bactofilin family protein | TPEKDK363_RS01330 | Not Available | Positive | 265995 - 266408 | 14873.0 |
| transcription termination factor rho | TPEKDK363_RS01335 | Not Available | Positive | 266645 - 268204 | 58269.2 |
| 50s ribosomal protein l31 | TPEKDK363_RS01340 | Not Available | Positive | 268323 - 268526 | 7599.34 |
| cdp-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | TPEKDK363_RS01345 | Not Available | Positive | 268571 - 269221 | 24639.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





