Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biotin transporter bioy | TPEKDK363_RS01200 | Not Available | Negative | 237770 - 238585 | 28770.9 |
| uracil-dna glycosylase | TPEKDK363_RS01205 | Not Available | Positive | 238550 - 239362 | 29944.1 |
| primosomal protein n' | TPEKDK363_RS01210 | Not Available | Positive | 239367 - 241340 | 72225.5 |
| rlua family pseudouridine synthase | TPEKDK363_RS01215 | Not Available | Positive | 241441 - 242091 | 23860.8 |
| stas domain-containing protein | TPEKDK363_RS01220 | Not Available | Positive | 242338 - 242883 | 19975.2 |
| Trna-thr | Not Available | Not Available | Positive | 243018 - 243090 | Not Available |
| 50s ribosomal protein l33 | TPEKDK363_RS01230 | Not Available | Positive | 243119 - 243289 | 6820.45 |
| Trna-trp | Not Available | Not Available | Positive | 243344 - 243416 | Not Available |
| preprotein translocase subunit sece | TPEKDK363_RS01240 | Not Available | Positive | 243439 - 243618 | 6789.68 |
| transcription termination/antitermination protein nusg | TPEKDK363_RS01245 | Not Available | Positive | 243628 - 244185 | 20929.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





