Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| stas domain-containing protein | TPEKDK363_RS01145 | Not Available | Positive | 226975 - 227301 | 11771.1 |
| m15 family metallopeptidase | TPEKDK363_RS01150 | Not Available | Positive | 227288 - 228085 | 30122.1 |
| hypothetical protein | TPEKDK363_RS01155 | Not Available | Positive | 228110 - 228541 | 15598.3 |
| aminotransferase class i/ii-fold pyridoxal phosphate-dependent enzyme | TPEKDK363_RS01160 | Not Available | Positive | 228678 - 230117 | 51890.7 |
| leucine-rich repeat domain-containing protein | TPEKDK363_RS01165 | Not Available | Positive | 230304 - 231044 | 26642.8 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 231228 - 232776 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 232889 - 232962 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 233072 - 236024 | Not Available |
| 5s ribosomal rna | Not Available | Not Available | Positive | 236073 - 236183 | Not Available |
| energy-coupling factor abc transporter atp-binding protein | TPEKDK363_RS01195 | Not Available | Negative | 236936 - 237703 | 27335.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





