Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chromate transporter | TPEKDK363_RS00785 | Not Available | Positive | 169813 - 170391 | 20965.4 |
| alpha-amylase/4-alpha-glucanotransferase domain-containing protein | TPEKDK363_RS00790 | Not Available | Negative | 170401 - 172260 | 70303.5 |
| hypothetical protein | TPEKDK363_RS00795 | Not Available | Negative | 172257 - 172835 | 21070.3 |
| hypothetical protein | TPEKDK363_RS00800 | Not Available | Negative | 172829 - 173422 | 21512.9 |
| hypothetical protein | TPEKDK363_RS00805 | Not Available | Negative | 173415 - 173882 | 17288.9 |
| rnfabcdge type electron transport complex subunit d | TPEKDK363_RS00810 | Not Available | Negative | 173866 - 174885 | 36935.4 |
| slbb domain-containing protein | TPEKDK363_RS00815 | Not Available | Negative | 174872 - 176356 | 53226.3 |
| divergent pap2 family protein | TPEKDK363_RS00825 | Not Available | Negative | 176492 - 176983 | 17514.3 |
| rlua family pseudouridine synthase | TPEKDK363_RS00830 | Not Available | Positive | 177031 - 178245 | 44048.8 |
| peptidoglycan dd-metalloendopeptidase family protein | TPEKDK363_RS00835 | Not Available | Positive | 178251 - 179366 | 40594.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





