Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine abc transporter permease | TPEKDK363_RS00625 | Not Available | Negative | 138141 - 138800 | 23022.3 |
| methionine abc transporter atp-binding protein | TPEKDK363_RS00630 | Not Available | Negative | 138800 - 139609 | 29738.5 |
| kama family radical sam protein | TPEKDK363_RS00635 | Not Available | Positive | 139739 - 140806 | 39102.2 |
| phosphoenolpyruvate carboxykinase (gtp) | TPEKDK363_RS00640 | Not Available | Negative | 141026 - 142882 | 68128.5 |
| tetratricopeptide repeat protein | TPEKDK363_RS00645 | Not Available | Positive | 142988 - 145558 | 97959.2 |
| redox-regulated atpase ychf | TPEKDK363_RS00650 | Not Available | Positive | 145572 - 146678 | 40492.7 |
| exodeoxyribonuclease iii | TPEKDK363_RS00655 | Not Available | Positive | 146755 - 147549 | 29644.8 |
| hypothetical protein | TPEKDK363_RS00660 | Not Available | Negative | 147613 - 148488 | 31922.7 |
| 30s ribosomal protein s16 | TPEKDK363_RS05335 | Not Available | Negative | 148812 - 148952 | 5411.55 |
| duf2715 domain-containing protein | TPEKDK363_RS00675 | Not Available | Positive | 149865 - 150245 | 13859.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





