Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uridine phosphorylase | TPEKDK363_RS05265 | Not Available | Positive | 1122367 - 1123143 | 27921.4 |
| atp-dependent helicase | TPEKDK363_RS05270 | Not Available | Negative | 1123159 - 1125171 | 75404.4 |
| dbpa rna binding domain-containing protein | TPEKDK363_RS05275 | Not Available | Negative | 1125254 - 1125940 | 25188.0 |
| major outer sheath n-terminal domain-containing protein | TPEKDK363_RS05280 | Not Available | Positive | 1125981 - 1127651 | 60970.8 |
| nusg domain ii-containing protein | TPEKDK363_RS05285 | Not Available | Negative | 1127719 - 1128153 | 15442.5 |
| patatin-like phospholipase family protein | TPEKDK363_RS05290 | Not Available | Negative | 1128165 - 1129100 | 33598.9 |
| sodium:calcium antiporter | TPEKDK363_RS05295 | Not Available | Positive | 1129174 - 1130199 | 35511.5 |
| valine--trna ligase | TPEKDK363_RS05300 | Not Available | Negative | 1130196 - 1133066 | 107379.0 |
| heavy metal translocating p-type atpase | TPEKDK363_RS05305 | Not Available | Positive | 1133219 - 1135597 | 84072.7 |
| paqr family membrane homeostasis protein trha | TPEKDK363_RS05310 | Not Available | Negative | 1135687 - 1136403 | 26096.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





