Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease y | TPEKDK363_RS05215 | Not Available | Positive | 1112055 - 1113569 | 57074.3 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | TPEKDK363_RS05220 | Not Available | Positive | 1113690 - 1114034 | 12559.6 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | TPEKDK363_RS05225 | Not Available | Positive | 1114035 - 1115555 | 54093.1 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | TPEKDK363_RS05230 | Not Available | Positive | 1115548 - 1117077 | 56868.2 |
| dna repair protein rada | TPEKDK363_RS05235 | Not Available | Negative | 1117173 - 1118540 | 49293.6 |
| recombination regulator recx | TPEKDK363_RS05240 | Not Available | Negative | 1118587 - 1119081 | 18874.7 |
| 30s ribosomal protein s9 | TPEKDK363_RS05245 | Not Available | Negative | 1119209 - 1119598 | 14239.2 |
| 50s ribosomal protein l13 | TPEKDK363_RS05250 | Not Available | Negative | 1119614 - 1120042 | 15770.5 |
| hypothetical protein | TPEKDK363_RS05395 | Not Available | Negative | 1120039 - 1120326 | 10011.5 |
| m3 family oligoendopeptidase | TPEKDK363_RS05260 | Not Available | Positive | 1120475 - 1122244 | 68796.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





