Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| periplasmic flagellar collar protein flca | TPEKDK363_RS05060 | Not Available | Positive | 1075651 - 1078752 | 116814.0 |
| rubredoxin | TPEKDK363_RS05065 | Not Available | Positive | 1078816 - 1078974 | 5568.52 |
| hypothetical protein | TPEKDK363_RS05070 | Not Available | Positive | 1079007 - 1079294 | 10148.0 |
| septal ring lytic transglycosylase rlpa family protein | TPEKDK363_RS05075 | Not Available | Negative | 1079363 - 1080388 | 36158.7 |
| Trna-leu | Not Available | Not Available | Positive | 1080506 - 1080591 | Not Available |
| tatd family hydrolase | TPEKDK363_RS05085 | Not Available | Positive | 1080672 - 1081553 | 32426.9 |
| cyclic nucleotide-binding domain-containing protein | TPEKDK363_RS05090 | Not Available | Positive | 1081635 - 1082969 | 50207.2 |
| hypothetical protein | TPEKDK363_RS05095 | Not Available | Negative | 1082999 - 1084615 | 61532.0 |
| Trna-ala | Not Available | Not Available | Positive | 1084639 - 1084712 | Not Available |
| signal peptide peptidase sppa | TPEKDK363_RS05105 | Not Available | Negative | 1084772 - 1086568 | 66672.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





