Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | TPEKDK363_RS00475 | Not Available | Positive | 101572 - 102114 | 21152.5 |
| anti-sigma factor family protein | TPEKDK363_RS00480 | Not Available | Positive | 102137 - 102745 | 22003.9 |
| phosphate acetyltransferase | TPEKDK363_RS00485 | Not Available | Positive | 102883 - 103893 | 36540.0 |
| tetratricopeptide repeat protein | TPEKDK363_RS00490 | Not Available | Positive | 103893 - 105839 | 72383.7 |
| trar/dksa family transcriptional regulator | TPEKDK363_RS00495 | Not Available | Negative | 105913 - 106275 | 13581.2 |
| translation initiation factor if-1 | TPEKDK363_RS00500 | Not Available | Positive | 106445 - 106663 | 8288.13 |
| j domain-containing protein | TPEKDK363_RS00505 | Not Available | Negative | 106716 - 107372 | 23675.6 |
| ump kinase | TPEKDK363_RS00510 | Not Available | Negative | 107376 - 108131 | 27300.5 |
| tlpa family protein disulfide reductase | TPEKDK363_RS00515 | Not Available | Positive | 108326 - 108928 | 22010.7 |
| cytochrome c biogenesis protein ccda | TPEKDK363_RS00520 | Not Available | Positive | 108921 - 109715 | 28288.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.





