Treponema pallidum subsp. pertenue strain Kampung Dalan K363

Gram-negativeSpirillaNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Treponemataceae

Genus

Treponema

Description

Treponema pallidum subsp. pertenue strain Kampung Dalan K363 is a Gram-negative spirochete characterized by its spiral shape and solitary cell arrangement. This strain is classified as an anaerobe, indicating that it thrives in environments devoid of oxygen. Treponema pallidum subsp. pertenue, as a subspecies, is known to be host-associated, suggesting a close relationship with specific hosts during its lifecycle. The organism's structure as a spirilla enables it to navigate through viscous environments, which is advantageous for its survival in host tissues. The Gram-negative nature of this strain reflects characteristics of its cell wall composition, which is typically thinner than that of Gram-positive bacteria and possesses an outer membrane containing lipopolysaccharides. Such features play a critical role in its interaction with the host's immune system, possibly influencing its pathogenic potential. While the specific pathogenicity of the Kampung Dalan K363 strain is not detailed, its classification within the Treponema genus implies a potential association with diseases that affect the host. The anaerobic requirement suggests that it may inhabit anaerobic niches within the host, such as deep tissue or mucosal surfaces, where oxygen levels are low. This ecological adaptation highlights the specialized role of Treponema pallidum subsp. pertenue strain Kampung Dalan K363 in its niche, emphasizing the importance of anaerobic conditions for its survival and the intricate relationships it may maintain with its host.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema pallidum
Strainsubsp. pertenue strain Kampung Dalan K363

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Treponema pallidum subsp. pertenue strain Kampung Dalan K363
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Treponema pallidum subsp. pertenue strain Kampung Dalan K363


Gene Summary

Adenine Count

268148 bp

Thymine Count

269857 bp

Guanine Count

302737 bp

Cytosine Count

298790 bp

Genome Length

1139764 bp

Protein-coding Genes

990 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
chromosomal replication initiator protein dnaaTPEKDK363_RS00005Not Available+4 - 139852968.4
dna polymerase iii subunit betaTPEKDK363_RS00015Not Available+1641 - 275641292.8
dna replication/repair protein recfTPEKDK363_RS00020Not Available+2701 - 383444064.4
duf721 domain-containing proteinTPEKDK363_RS00025Not Available+3827 - 426416338.6
dna topoisomerase (atp-hydrolyzing) subunit aTPEKDK363_RS00030Not Available+4391 - 683289919.9
duf3798 domain-containing proteinTPEKDK363_RS00035Not Available+6976 - 826247414.9
major outer sheath n-terminal domain-containing proteinTPEKDK363_RS00040Not Available-8345 - 982953970.1
major outer sheath c-terminal domain-containing proteinTPEKDK363_RS00045Not Available+10400 - 1238271110.1
duf3798 domain-containing proteinTPEKDK363_RS00050Not Available+12549 - 1378145146.0
phenylalanine--trna ligase subunit betaTPEKDK363_RS00055Not Available+13972 - 1578667193.9

Displaying genes 1 – 10 of 1044 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites