Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema pallidum |
| Strain | subsp. pertenue strain Kampung Dalan K363 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
268148 bp
Thymine Count
269857 bp
Guanine Count
302737 bp
Cytosine Count
298790 bp
Genome Length
1139764 bp
Protein-coding Genes
990 genes
Non-Coding Genes
54 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | TPEKDK363_RS00005 | Not Available | + | 4 - 1398 | 52968.4 |
| dna polymerase iii subunit beta | TPEKDK363_RS00015 | Not Available | + | 1641 - 2756 | 41292.8 |
| dna replication/repair protein recf | TPEKDK363_RS00020 | Not Available | + | 2701 - 3834 | 44064.4 |
| duf721 domain-containing protein | TPEKDK363_RS00025 | Not Available | + | 3827 - 4264 | 16338.6 |
| dna topoisomerase (atp-hydrolyzing) subunit a | TPEKDK363_RS00030 | Not Available | + | 4391 - 6832 | 89919.9 |
| duf3798 domain-containing protein | TPEKDK363_RS00035 | Not Available | + | 6976 - 8262 | 47414.9 |
| major outer sheath n-terminal domain-containing protein | TPEKDK363_RS00040 | Not Available | - | 8345 - 9829 | 53970.1 |
| major outer sheath c-terminal domain-containing protein | TPEKDK363_RS00045 | Not Available | + | 10400 - 12382 | 71110.1 |
| duf3798 domain-containing protein | TPEKDK363_RS00050 | Not Available | + | 12549 - 13781 | 45146.0 |
| phenylalanine--trna ligase subunit beta | TPEKDK363_RS00055 | Not Available | + | 13972 - 15786 | 67193.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.




