Pseudomonas putida strain E46

Gram-negativeRodMotileFacultative

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas putida strain E46 is a gram-negative, rod-shaped bacterium that thrives in soil and wastewater environments. This organism is a heterotroph, obtaining its energy from organic compounds. It is classified as facultatively anaerobic, allowing it to survive and grow in both oxygen-rich and oxygen-poor conditions. Strain E46 is motile, possessing flagella that facilitate its movement, and it typically exists as single cells rather than in clusters. The strain has a mesophilic temperature range, indicating that it prefers moderate temperatures for growth. It possesses one replicon and has a double membrane structure, characteristic of gram-negative bacteria. Pseudomonas putida strain E46 is free-living and has a diverse range of hosts, including Homo sapiens, various plant species such as Triticum aestivum (wheat), Solanum lycopersicum (tomato), and Oryza sativa (rice), as well as several green algae and other organisms. While this bacterium can play beneficial roles in the environment, such as in bioremediation, it is also associated with nosocomial infections in animals. This dual nature highlights the ecological versatility of Pseudomonas putida strain E46, as it can adapt to various ecological niches while also posing potential health risks. Understanding this strain's characteristics can aid in both its application in biotechnology and its management in clinical settings.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas putida
Strainstrain E46

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas putida strain E46
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatSoil - Wastewater
Biotic relationshipFree living
Host(s)Homo sapiens, Viridiplantae, Triticum aestivum
Cell arrangementSingles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas putida strain E46 chromosome, complete genome.

Gene Summary

Adenine Count

1166497 bp

Thymine Count

1165379 bp

Guanine Count

1923028 bp

Cytosine Count

1926063 bp

Genome Length

6180967 bp

Protein-coding Genes

5318 genes

Non-Coding Genes

113 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s1CR512_RS06675Not AvailablePositive1485198 - 148687461559.2
rep-associated tyrosine transposaseCR512_RS06680Not AvailableNegative1487022 - 148747717674.7
integration host factor subunit betaCR512_RS06685Not AvailablePositive1488003 - 148829911028.2
lipopolysaccharide assembly protein lapa domain-containing proteinCR512_RS06690Not AvailablePositive1488318 - 14885819181.68
mbl fold metallo-hydrolase rna specificity domain-containing proteinCR512_RS06695Not AvailablePositive1488685 - 149012752235.5
lps o-antigen chain length determinant protein wzzbCR512_RS06700Not AvailablePositive1490383 - 149142938226.9
udp-n-acetyl-d-glucosamine 6-dehydrogenaseCR512_RS06705Not AvailablePositive1491768 - 149308148038.9
udp-n-acetyl-2-amino-2-deoxy-d-glucuronate oxidaseCR512_RS06710Not AvailablePositive1493153 - 149410335837.7
acyltransferase family proteinCR512_RS06715Not AvailablePositive1494236 - 149606866990.5
udp-2-acetamido-3-amino-2, 3-dideoxy-d-glucuronate n-acetyltransferaseCR512_RS06720Not AvailablePositive1496065 - 149664020825.9

Displaying genes 1331 – 1340 of 5431 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Nosocomial infectionsCausesPMC11585281
Nosocomial infectionsCausesPMC13243026

Displaying health effects 1 – 2 of 2 in total