Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga caeni |
| Strain | strain 13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1518061 bp
Thymine Count
1515796 bp
Guanine Count
1118484 bp
Cytosine Count
1127580 bp
Genome Length
5279921 bp
Protein-coding Genes
4290 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i methionyl aminopeptidase | COR50_RS00400 | Not Available | Positive | 81733 - 82500 | 27926.4 |
| outer membrane beta-barrel family protein | COR50_RS00405 | Not Available | Positive | 82636 - 85044 | 90712.5 |
| sensor histidine kinase | COR50_RS00410 | Not Available | Positive | 85093 - 86214 | 43846.1 |
| lytr/algr family response regulator transcription factor | COR50_RS00415 | Not Available | Positive | 86211 - 86945 | 27485.6 |
| esterase-like activity of phytase family protein | COR50_RS00420 | Not Available | Positive | 86990 - 88159 | 43373.6 |
| zinc-dependent metalloprotease | COR50_RS00425 | Not Available | Positive | 88327 - 90921 | 96117.0 |
| efflux rnd transporter periplasmic adaptor subunit | COR50_RS00430 | Not Available | Negative | 91006 - 92190 | 43320.6 |
| efflux rnd transporter periplasmic adaptor subunit | COR50_RS00435 | Not Available | Negative | 92195 - 93289 | 40415.7 |
| tolc family protein | COR50_RS00440 | Not Available | Negative | 93302 - 94558 | 47606.9 |
| efflux rnd transporter permease subunit | COR50_RS00445 | Not Available | Negative | 94561 - 96495 | 71880.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
