Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga caeni |
| Strain | strain 13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1518061 bp
Thymine Count
1515796 bp
Guanine Count
1118484 bp
Cytosine Count
1127580 bp
Genome Length
5279921 bp
Protein-coding Genes
4290 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4332 domain-containing protein | COR50_RS02930 | Not Available | Negative | 719252 - 719659 | 14552.6 |
| m23 family metallopeptidase | COR50_RS02935 | Not Available | Positive | 719875 - 721584 | 63860.3 |
| thioredoxin-dependent thiol peroxidase | COR50_RS02940 | Not Available | Positive | 721592 - 722059 | 17791.3 |
| sumf1/egtb/pvdo family nonheme iron enzyme | COR50_RS02945 | Not Available | Negative | 722256 - 723785 | 57986.0 |
| type ix secretion system sortase poru | COR50_RS02950 | Not Available | Positive | 724001 - 727381 | 124249.0 |
| type ix secretion system outer membrane channel protein porv | COR50_RS02955 | Not Available | Positive | 727489 - 728640 | 42288.6 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | COR50_RS02960 | Not Available | Positive | 728772 - 729254 | 17305.2 |
| dutp diphosphatase | COR50_RS02965 | Not Available | Positive | 729325 - 729768 | 15934.4 |
| tetratricopeptide repeat protein | COR50_RS02970 | Not Available | Positive | 729776 - 731536 | 67419.4 |
| duf4292 domain-containing protein | COR50_RS02975 | Not Available | Positive | 731576 - 732415 | 31401.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
