Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga caeni |
| Strain | strain 13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1518061 bp
Thymine Count
1515796 bp
Guanine Count
1118484 bp
Cytosine Count
1127580 bp
Genome Length
5279921 bp
Protein-coding Genes
4290 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclear transport factor 2 family protein | COR50_RS02830 | Not Available | Negative | 696384 - 697121 | 28296.8 |
| plp-dependent aminotransferase family protein | COR50_RS02835 | Not Available | Positive | 697263 - 698678 | 52067.2 |
| response regulator transcription factor | COR50_RS02840 | Not Available | Positive | 698720 - 699406 | 26246.6 |
| sensor histidine kinase | COR50_RS02845 | Not Available | Positive | 699420 - 700766 | 50924.1 |
| tolc family protein | COR50_RS02850 | Not Available | Positive | 700894 - 702285 | 51745.2 |
| efflux rnd transporter permease subunit | COR50_RS02855 | Not Available | Positive | 702304 - 705582 | 119225.0 |
| efflux rnd transporter periplasmic adaptor subunit | COR50_RS02860 | Not Available | Positive | 705620 - 706747 | 40544.3 |
| class 1 isoprenoid biosynthesis enzyme | COR50_RS02865 | Not Available | Negative | 706819 - 707733 | 33326.2 |
| winged helix-turn-helix transcriptional regulator | COR50_RS02870 | Not Available | Positive | 707918 - 708364 | 17058.2 |
| lysr family transcriptional regulator | COR50_RS02875 | Not Available | Negative | 708365 - 709264 | 34710.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
