Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga caeni |
| Strain | strain 13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1518061 bp
Thymine Count
1515796 bp
Guanine Count
1118484 bp
Cytosine Count
1127580 bp
Genome Length
5279921 bp
Protein-coding Genes
4290 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat repeat domain-containing protein | COR50_RS19070 | Not Available | Negative | 4548525 - 4549655 | 43375.1 |
| response regulator transcription factor | COR50_RS19075 | Not Available | Negative | 4549691 - 4550062 | 13811.0 |
| thioredoxin family protein | COR50_RS19080 | Not Available | Positive | 4550910 - 4552151 | 47312.9 |
| tlpa family protein disulfide reductase | COR50_RS19085 | Not Available | Positive | 4552167 - 4553345 | 43946.2 |
| pkd-like family lipoprotein | COR50_RS19090 | Not Available | Negative | 4553614 - 4555107 | 56759.0 |
| duf4843 domain-containing protein | COR50_RS19095 | Not Available | Negative | 4555132 - 4555902 | 29378.2 |
| ragb/susd family nutrient uptake outer membrane protein | COR50_RS19100 | Not Available | Negative | 4555913 - 4557358 | 54301.6 |
| susc/raga family tonb-linked outer membrane protein | COR50_RS19105 | Not Available | Negative | 4557370 - 4560723 | 124584.0 |
| fecr family protein | COR50_RS19110 | Not Available | Negative | 4560842 - 4561981 | 42183.9 |
| rna polymerase sigma-70 factor | COR50_RS19115 | Not Available | Negative | 4562072 - 4562596 | 20503.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
