Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga caeni |
| Strain | strain 13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1518061 bp
Thymine Count
1515796 bp
Guanine Count
1118484 bp
Cytosine Count
1127580 bp
Genome Length
5279921 bp
Protein-coding Genes
4290 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | COR50_RS19020 | Not Available | Positive | 4528665 - 4531982 | 124383.0 |
| ragb/susd family nutrient uptake outer membrane protein | COR50_RS19025 | Not Available | Positive | 4531994 - 4533436 | 54869.2 |
| duf4843 domain-containing protein | COR50_RS19030 | Not Available | Positive | 4533454 - 4534215 | 28767.4 |
| pkd-like family lipoprotein | COR50_RS19035 | Not Available | Positive | 4534242 - 4535732 | 55894.1 |
| tlpa disulfide reductase family protein | COR50_RS19040 | Not Available | Positive | 4535761 - 4536804 | 39049.4 |
| m16 family metallopeptidase | COR50_RS19045 | Not Available | Positive | 4537149 - 4540001 | 106305.0 |
| gh92 family glycosyl hydrolase | COR50_RS19050 | Not Available | Negative | 4540318 - 4542597 | 85220.9 |
| duf4838 domain-containing protein | COR50_RS19055 | Not Available | Negative | 4542933 - 4545122 | 82743.0 |
| yaio family outer membrane beta-barrel protein | COR50_RS19060 | Not Available | Negative | 4545176 - 4547068 | 72664.2 |
| glycosyltransferase family 2 protein | COR50_RS19065 | Not Available | Negative | 4547077 - 4548525 | 55701.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
