Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga caeni |
| Strain | strain 13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1518061 bp
Thymine Count
1515796 bp
Guanine Count
1118484 bp
Cytosine Count
1127580 bp
Genome Length
5279921 bp
Protein-coding Genes
4290 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tlpa family protein disulfide reductase | COR50_RS17890 | Not Available | Negative | 4249910 - 4251895 | 74994.5 |
| ragb/susd family nutrient uptake outer membrane protein | COR50_RS17895 | Not Available | Negative | 4251920 - 4253278 | 50842.4 |
| susc/raga family tonb-linked outer membrane protein | COR50_RS17900 | Not Available | Negative | 4253301 - 4256861 | 132979.0 |
| fecr family protein | COR50_RS17905 | Not Available | Negative | 4256896 - 4257927 | 38530.9 |
| rna polymerase sigma-70 factor | COR50_RS17910 | Not Available | Negative | 4258020 - 4258568 | 21631.2 |
| pyridoxal phosphate-dependent aminotransferase | COR50_RS17915 | Not Available | Negative | 4259177 - 4260283 | 41209.6 |
| snoal-like domain-containing protein | COR50_RS17920 | Not Available | Positive | 4260572 - 4260967 | 14959.8 |
| tolc family protein | COR50_RS17925 | Not Available | Negative | 4261366 - 4262799 | 52825.3 |
| efflux rnd transporter permease subunit | COR50_RS17930 | Not Available | Negative | 4262774 - 4265959 | 117074.0 |
| efflux rnd transporter periplasmic adaptor subunit | COR50_RS17935 | Not Available | Negative | 4265987 - 4267075 | 40658.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
