Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga caeni |
| Strain | strain 13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1518061 bp
Thymine Count
1515796 bp
Guanine Count
1118484 bp
Cytosine Count
1127580 bp
Genome Length
5279921 bp
Protein-coding Genes
4290 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | COR50_RS12540 | Not Available | Positive | 2968320 - 2969483 | 42317.5 |
| rip metalloprotease rsep | COR50_RS12545 | Not Available | Positive | 2969525 - 2970871 | 49910.3 |
| Tmrna,resume consensus sequence (at 91): tttaaatggcgaaaataa | Not Available | Not Available | Positive | 2970961 - 2971333 | Not Available |
| hypothetical protein | COR50_RS22610 | Not Available | Negative | 2971718 - 2971870 | 5698.97 |
| rhs repeat-associated core domain-containing protein | COR50_RS22760 | Not Available | Positive | 2971841 - 2972146 | 11607.1 |
| srpbcc family protein | COR50_RS12560 | Not Available | Positive | 2972183 - 2973163 | 37343.3 |
| is256 family transposase | COR50_RS12565 | Not Available | Negative | 2973237 - 2974433 | 45963.3 |
| wg repeat-containing protein | COR50_RS12570 | Not Available | Negative | 2974568 - 2976955 | 89829.4 |
| hypothetical protein | COR50_RS12575 | Not Available | Negative | 2976958 - 2978310 | 51969.4 |
| t9ss type a sorting domain-containing protein | COR50_RS12580 | Not Available | Positive | 2979100 - 2981424 | 86835.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
