Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga caeni |
| Strain | strain 13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1518061 bp
Thymine Count
1515796 bp
Guanine Count
1118484 bp
Cytosine Count
1127580 bp
Genome Length
5279921 bp
Protein-coding Genes
4290 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| calx-beta domain-containing protein | COR50_RS12490 | Not Available | Positive | 2946953 - 2959627 | 421942.0 |
| type ix secretion system membrane protein porp/sprf | COR50_RS12495 | Not Available | Positive | 2959671 - 2960585 | 34533.4 |
| pldc n-terminal domain-containing protein | COR50_RS12500 | Not Available | Positive | 2961589 - 2961804 | 8565.62 |
| dsba family protein | COR50_RS12505 | Not Available | Negative | 2961812 - 2962444 | 23337.0 |
| prsw family intramembrane metalloprotease | COR50_RS12510 | Not Available | Negative | 2962454 - 2963173 | 27023.8 |
| dna polymerase/3'-5' exonuclease polx | COR50_RS12515 | Not Available | Negative | 2963170 - 2964858 | 62965.1 |
| histone | COR50_RS22755 | Not Available | Negative | 2965199 - 2965678 | 15829.3 |
| 50s ribosomal protein l27 | COR50_RS12525 | Not Available | Negative | 2965775 - 2966023 | 8919.77 |
| 50s ribosomal protein l21 | COR50_RS12530 | Not Available | Negative | 2966081 - 2966383 | 11295.0 |
| gh3 auxin-responsive promoter family protein | COR50_RS12535 | Not Available | Positive | 2966721 - 2968214 | 56154.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
