Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga caeni |
| Strain | strain 13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1518061 bp
Thymine Count
1515796 bp
Guanine Count
1118484 bp
Cytosine Count
1127580 bp
Genome Length
5279921 bp
Protein-coding Genes
4290 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | COR50_RS10880 | Not Available | Positive | 2545878 - 2546429 | 20991.5 |
| anti-sigma factor domain-containing protein | COR50_RS10885 | Not Available | Positive | 2546436 - 2547314 | 32756.1 |
| hypothetical protein | COR50_RS10890 | Not Available | Positive | 2547419 - 2548342 | 35491.4 |
| t9ss type b sorting domain-containing protein | COR50_RS10895 | Not Available | Negative | 2548439 - 2550121 | 61606.1 |
| rlua family pseudouridine synthase | COR50_RS10900 | Not Available | Negative | 2550210 - 2551280 | 40871.6 |
| lipoyl(octanoyl) transferase lipb | COR50_RS10905 | Not Available | Positive | 2551369 - 2552109 | 28162.8 |
| hypothetical protein | COR50_RS10910 | Not Available | Negative | 2552220 - 2552933 | 27317.1 |
| 1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase | COR50_RS10915 | Not Available | Negative | 2553000 - 2553887 | 32610.2 |
| family 20 glycosylhydrolase | COR50_RS10920 | Not Available | Negative | 2553925 - 2556234 | 86518.9 |
| alpha-l-fucosidase | COR50_RS10925 | Not Available | Negative | 2556314 - 2557651 | 50739.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
