Chitinophaga caeni strain 13

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Chitinophagia

Order

Chitinophagales

Family

Chitinophagaceae

Genus

Chitinophaga

Description

Chitinophaga caeni strain 13 is a Gram-negative, rod-shaped bacterium. This organism is characterized by having a single replicon, which is significant in terms of its genetic organization and replication. The strain has been cataloged with the accession number NZ_CP023777.1, allowing for its identification in genomic databases. Chitinophaga caeni, as a member of the Chitinophagaceae family, is likely involved in the degradation of chitin, a polysaccharide found in the exoskeletons of arthropods and the cell walls of fungi. This trait suggests that Chitinophaga caeni strain 13 may play a role in nutrient cycling within its ecosystem, particularly in environments rich in organic matter derived from decaying organisms. The ability to degrade chitin can contribute to soil health and fertility, as it helps break down complex organic materials, making nutrients available for other organisms in the ecosystem. Overall, Chitinophaga caeni strain 13 exemplifies the ecological importance of microorganisms in the decomposition and nutrient cycling processes, highlighting their role in maintaining ecosystem balance and promoting soil health.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassChitinophagia
OrderChitinophagales
FamilyChitinophagaceae
GenusChitinophaga
SpeciesChitinophaga caeni
Strainstrain 13

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chitinophaga caeni strain 13 chromosome, complete genome.

Gene Summary

Adenine Count

1518061 bp

Thymine Count

1515796 bp

Guanine Count

1118484 bp

Cytosine Count

1127580 bp

Genome Length

5279921 bp

Protein-coding Genes

4290 genes

Non-Coding Genes

76 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
t9ss type a sorting domain-containing proteinCOR50_RS09700Not AvailableNegative2303395 - 230391018725.4
elongation factor gCOR50_RS09705Not AvailablePositive2304443 - 230659079406.1
outer membrane beta-barrel proteinCOR50_RS09710Not AvailablePositive2306907 - 230753322425.9
30s ribosomal protein s10COR50_RS09720Not AvailablePositive2308163 - 230846811384.0
50s ribosomal protein l3COR50_RS09725Not AvailablePositive2308626 - 230924321808.3
50s ribosomal protein l4COR50_RS09730Not AvailablePositive2309246 - 230989323901.8
50s ribosomal protein l23COR50_RS09735Not AvailablePositive2309974 - 231027311076.5
50s ribosomal protein l2COR50_RS09740Not AvailablePositive2310361 - 231119430074.5
30s ribosomal protein s19COR50_RS09745Not AvailablePositive2311263 - 231152910094.4
50s ribosomal protein l22COR50_RS09750Not AvailablePositive2311628 - 231197813179.2

Displaying genes 1911 – 1920 of 4366 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.