Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga caeni |
| Strain | strain 13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1518061 bp
Thymine Count
1515796 bp
Guanine Count
1118484 bp
Cytosine Count
1127580 bp
Genome Length
5279921 bp
Protein-coding Genes
4290 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chat domain-containing protein | COR50_RS00870 | Not Available | Negative | 206476 - 209211 | 104385.0 |
| pkd domain-containing protein | COR50_RS00875 | Not Available | Negative | 209273 - 211270 | 74785.8 |
| hypothetical protein | COR50_RS22205 | Not Available | Negative | 211422 - 211634 | 7835.61 |
| rna polymerase sigma factor | COR50_RS00880 | Not Available | Positive | 211889 - 212470 | 22274.9 |
| hypothetical protein | COR50_RS00885 | Not Available | Positive | 212467 - 213198 | 28093.2 |
| alpha-l-fucosidase | COR50_RS00890 | Not Available | Negative | 213485 - 214873 | 53923.3 |
| hth domain-containing protein | COR50_RS00895 | Not Available | Negative | 215203 - 215469 | 10449.1 |
| hypothetical protein | COR50_RS00900 | Not Available | Positive | 216399 - 217031 | 24399.0 |
| glycosyl hydrolase family 95 catalytic domain-containing protein | COR50_RS00905 | Not Available | Positive | 217299 - 219782 | 92099.3 |
| mechanosensitive ion channel family protein | COR50_RS00910 | Not Available | Positive | 220048 - 221673 | 61367.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
