Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga caeni |
| Strain | strain 13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1518061 bp
Thymine Count
1515796 bp
Guanine Count
1118484 bp
Cytosine Count
1127580 bp
Genome Length
5279921 bp
Protein-coding Genes
4290 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysm peptidoglycan-binding domain-containing protein | COR50_RS06300 | Not Available | Positive | 1487924 - 1488307 | 13775.3 |
| lysophospholipid acyltransferase family protein | COR50_RS06305 | Not Available | Negative | 1488792 - 1489676 | 34597.7 |
| l-aspartate oxidase | COR50_RS06310 | Not Available | Negative | 1489695 - 1491293 | 59287.2 |
| lysoplasmalogenase | COR50_RS06315 | Not Available | Negative | 1491391 - 1492071 | 26241.0 |
| sensor histidine kinase | COR50_RS06320 | Not Available | Negative | 1492110 - 1493447 | 50091.4 |
| sigma-54-dependent transcriptional regulator | COR50_RS06325 | Not Available | Negative | 1493461 - 1494825 | 51440.7 |
| efflux rnd transporter periplasmic adaptor subunit | COR50_RS06330 | Not Available | Positive | 1495114 - 1496361 | 47404.8 |
| abc transporter atp-binding protein | COR50_RS06335 | Not Available | Positive | 1496430 - 1497119 | 25707.0 |
| abc transporter permease | COR50_RS06340 | Not Available | Positive | 1497146 - 1499518 | 88036.3 |
| hypothetical protein | COR50_RS06345 | Not Available | Positive | 1499531 - 1499950 | 15543.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
