Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga caeni |
| Strain | strain 13 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1518061 bp
Thymine Count
1515796 bp
Guanine Count
1118484 bp
Cytosine Count
1127580 bp
Genome Length
5279921 bp
Protein-coding Genes
4290 genes
Non-Coding Genes
76 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 88 protein | COR50_RS00500 | Not Available | Negative | 110900 - 112978 | 78010.7 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | COR50_RS00505 | Not Available | Negative | 113147 - 113989 | 31683.8 |
| uxaa family hydrolase | COR50_RS00510 | Not Available | Positive | 114277 - 115923 | 59191.8 |
| mfs transporter | COR50_RS00520 | Not Available | Negative | 116408 - 117724 | 48267.5 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | COR50_RS00525 | Not Available | Negative | 117768 - 118430 | 23912.0 |
| sugar kinase | COR50_RS00530 | Not Available | Negative | 118462 - 119463 | 36676.8 |
| glucuronate isomerase | COR50_RS00535 | Not Available | Negative | 119451 - 120857 | 53759.6 |
| tagaturonate reductase | COR50_RS00540 | Not Available | Negative | 120854 - 122371 | 57506.4 |
| trna 2-thiouridine(34) synthase mnma | COR50_RS00545 | Not Available | Positive | 122551 - 123660 | 40958.8 |
| rsmb/nop family class i sam-dependent rna methyltransferase | COR50_RS00550 | Not Available | Negative | 124008 - 125177 | 44052.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
