Methylosinus trichosporium OB3b

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Methylocystaceae

Genus

Methylosinus

Description

Methylosinus trichosporium OB3b is a notable methanotrophic bacterium characterized by its ability to utilize methane as a carbon and energy source. It possesses a unique genomic structure comprising three replicons, which contributes to its metabolic versatility and adaptability in various environments. The organism's genomic information can be accessed through several accession numbers: NZ_CP023737.1, NZ_CP023739.1, and NZ_CP023740.1. This bacterium plays a significant role in the carbon cycle, particularly in the oxidation of methane, a potent greenhouse gas. By converting methane into biomass and other metabolites, Methylosinus trichosporium OB3b helps mitigate the effects of climate change by reducing the amount of methane released into the atmosphere. Its presence in soil and aquatic ecosystems highlights its ecological importance, as it contributes to the maintenance of carbon balance by fostering microbial communities that enhance nutrient cycling. In summary, Methylosinus trichosporium OB3b exemplifies the intricate connections between microbial life and environmental processes, particularly in its role in methane oxidation and its contribution to ecological stability. Its three replicons suggest a complex genetic framework that supports its specialized metabolic functions, underscoring its significance in both microbiology and environmental science.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyMethylocystaceae
GenusMethylosinus
SpeciesMethylosinus trichosporium
StrainOB3b

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Methylosinus trichosporium OB3b plasmid pOB3b3, complete sequence.

Gene Summary

Adenine Count

32989 bp

Thymine Count

32554 bp

Guanine Count

55973 bp

Cytosine Count

58703 bp

Genome Length

180219 bp

Protein-coding Genes

124 genes

Non-Coding Genes

18 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf2200 domain-containing proteinCQW49_RS00245Not AvailableNegative55585 - 5593813353.2
serine o-acetyltransferaseCQW49_RS00250Not AvailableNegative55955 - 5678529214.9
plp-dependent aminotransferase family proteinCQW49_RS00255Not AvailableNegative56855 - 5836354735.6
rhodanese-like domain-containing proteinCQW49_RS00260Not AvailableNegative58859 - 5917911325.3
l,d-transpeptidase family proteinCQW49_RS00265Not AvailableNegative59264 - 6042741860.7
adenine phosphoribosyltransferaseCQW49_RS00270Not AvailableNegative60574 - 6110118698.0
simpl domain-containing proteinCQW49_RS00275Not AvailableNegative61274 - 6199925565.9
s-methyl-5'-thioadenosine phosphorylaseCQW49_RS00280Not AvailableNegative62044 - 6292530986.1
hypothetical proteinCQW49_RS00285Not AvailablePositive63093 - 6344913050.9
f0f1 atp synthase subunit deltaCQW49_RS00290Not AvailablePositive63713 - 6427619381.6

Displaying genes 601 – 610 of 4627 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

4 records
Metabolite IDMetabolite nameStructureCAS number
BASm0003138N(5)-formyl-5,6,7,8-tetrahydromethanopterinC31H42N6O17PChemical structure of N(5)-formyl-5,6,7,8-tetrahydromethanopterinNot available
Average801.677Da
Monoisotopic801.2360517Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm0020291Cyclopentyl methanolC6H12OChemical structure of Cyclopentyl methanol67-56-1
Average100.1589Da
Monoisotopic100.088815006Da

Displaying 1–4 of 4 metabolites

Health Effects

No health effects information available for this bacterium.